# qupath

**Repository Path**: wangch666/qupath

## Basic Information

- **Project Name**: qupath
- **Description**: QuPath - Open Source Digital Pathology
- **Primary Language**: Unknown
- **License**: Apache-2.0
- **Default Branch**: master
- **Homepage**: None
- **GVP Project**: No

## Statistics

- **Stars**: 1
- **Forks**: 1
- **Created**: 2020-06-04
- **Last Updated**: 2024-05-29

## Categories & Tags

**Categories**: Uncategorized

**Tags**: None

## README

[![Image.sc forum](https://img.shields.io/badge/dynamic/json.svg?label=forum&url=https%3A%2F%2Fforum.image.sc%2Ftags%2Fqupath.json&query=%24.topic_list.tags.0.topic_count&colorB=brightgreen&suffix=%20topics&logo=data:image/png;base64,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)](https://forum.image.sc/tags/qupath)

QuPath
======

**QuPath is open source software for bioimage analysis**.

Features include:

* Extensive tools to annotate and view images, including whole slide images
* Workflows for both IHC and H&E analysis
* New algorithms for common tasks, e.g. cell segmentation, tissue microarray dearraying
* Interactive machine learning, e.g. for cell & texture classification
* Customization, batch-processing & data interrogation by scripting
* Easy integration with other tools, including ImageJ


To **download QuPath**, go to the [Latest Releases](https://github.com/qupath/qupath/releases/latest) page.

For **documentation**, see [https://qupath.readthedocs.io](https://qupath.readthedocs.io)

For **help & support**, try [image.sc](https://forum.image.sc/tags/qupath) or the [links here](https://qupath.readthedocs.io/en/latest/docs/starting/help.html)

To **build QuPath from source** see [here](https://qupath.readthedocs.io/en/latest/docs/reference/building.html).


*QuPath is an academic project intended for research use only.*
*The software has been made freely available under the terms of the [GPLv3](https://github.com/qupath/qupath/blob/master/LICENSE.md) in the hope it is useful for this purpose, and to make analysis methods open and transparent.*

If you find QuPath useful in work that you publish, please [cite the publication](https://qupath.readthedocs.io/en/latest/docs/intro/citing.html).



## Developers

QuPath is being actively developed at the University of Edinburgh by:

* Pete Bankhead (creator)
* Melvin Gelbard

For all contributors, see [here](https://github.com/qupath/qupath/graphs/contributors).


----

## Background

QuPath was designed, implemented and documented by Pete Bankhead while at Queen's University Belfast, with additional code and testing by Jose Fernandez.

Versions up to v0.1.2 are copyright 2014-2016 The Queen's University of Belfast, Northern Ireland.
These were written as part of projects that received funding from:

* Invest Northern Ireland (RDO0712612)
* Cancer Research UK Accelerator (C11512/A20256)


![Image](https://raw.githubusercontent.com/wiki/qupath/qupath/images/qupath_demo.jpg)